8jks_CD : 3D-footprint complex

structure name	T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF
reference	Wang et al. Structure 31 1441 2023
source	Homo sapiens
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jks_C interface=75,78,79,83, ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp > 8jks_D interface=35,74,77,78,79,82, gklrqwlidqidsgkypglvweneeksifripwkHagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe
interface signature	RRCK/HRRCAK

Estimated binding specificities ?

readout + contact

# IC=11.139 IC/col=1.013 n_of_columns=11

specificity:

A |   0   0   6   5   0   0   5   0   6   5  80
C |   0  96   5  81   0   0   5  96   5  81   5
G |   0   0   5   5  96  96   6   0   5   5   6
T |  96   0  80   5   0   0  80   0  80   5   5

scan!

home
updated Sat Jun 27 13:42:03 2026