8jks_GH : 3D-footprint complex

structure name	T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF
reference	Wang et al. Structure 31 1441 2023
source	Homo sapiens
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7oot_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jks_G interface=74,77,78,82, gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp > 8jks_H interface=35,74,77,78,79,82, gklrqwlidqidsgkypglvweneeksifripwkHagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe
interface signature	RRCK/HRRCAK

Estimated binding specificities ?

readout + contact

# IC=10.992 IC/col=0.999 n_of_columns=11

specificity:

A |   0   4  81   7  96   0  11   9  81   0  96
C |   0   4   7   4   0  96  76   6   4   0   0
G |   0  81   4  81   0   0   0  72   4  96   0
T |  96   7   4   4   0   0   9   9   7   0   0

scan!

home
updated Thu Jan 8 04:08:03 2026