Interface of input file ?
legend pdf
legend
3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.
Dendrogram of similar interfaces ?
matrix format| structure name | CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING H3.8 |
| experiment | NMR |
| structural superfamily | Histone-fold; |
| sequence family | Core histone H2A/H2B/H3/H4; |
| multimeric complexes | 8kb5_ABCDEFGH |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
RA----LT----RC------ +3kwq_E +--------------1 RG----------RT------ +---11 +8grq_A ! ! RT----LA----RG------ +---18 +--------------7unc_a ! ! RG----------RG------ ! +-------------------6iy2_A ! RT--RG-------------- ! +-------------------6pww_K ! ! ------EA------RG---- ! ! +---------7n8n_A ! ! +-----9 ------------RA----RA ! ! ! +---------6a5l_g ! ! ! ----------------KG-- ! ! +-12 +-7nkx_f ! +-17 ! ! +--------6 ------------RA------ ! ! ! ! ! ! ! +1zla_C ! ! ! ! ! ! +-5 ------------RG------ ! ! ! ! +---10 +8ox0_C ! ! ! +-15 ! ------------RG------ ! ! ! ! ! ! +3w99_F -24 ! ! ! ! +----------3 ------------RG------ ! +-20 ! ! ! +8jla_C ! ! ! +-16 ! ------LT------------ ! ! ! ! +-----------------7ywx_E ! ! ! ! ----------IT-------- ! ! ! ! +3wkj_D ! ! ! +------------------2 --------------RA---- ! +-21 ! +6g0l_D ! ! ! ! RG------------------ ! ! ! +--------------------5z3u_A ! ! ! ------------RC------ ! ! ! +---7xyf_B ! ! ! +------------8 ------------RT------ ! +-22 ! ! +---7kbd_C ! ! ! +---14 --------KT---------- L ! ! ! ! +-7cvo_A ! ! ! +--------------7 ------------RG------ ! ! ! +-5x0y_G +-23 ! RGYG--QC----RG------ ! +----------------------7y7i_E ! RG----------RT------ ! +--------------------7zs9_e +-19 RAYT--LT----RC------ ! +---------------4xzq_E +---13 RCYA--------RG------ ! +7ccr_A +--------------4 RG----LC----RT------ +8hr1_E |
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updated Mon Aug 4 01:35:01 2025