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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF M. POLYMORPHA AUXIN RESPONSE FACTOR 2 (MPARF2) IN COMPLEX WITH HIGH AFFINITY DNA
(Auxin response factor)
referenceWeijers et al. 'To ? ? ?
sourceMarchantia polymorpha
experimentX-ray (resolution=2.57, R-factor=0.243)
structural superfamilyDNA-binding pseudobarrel domain;
sequence familyB3 DNA binding domain; Auxin response factor;
multimeric complexes6sdg_AB
reference complex8oj2_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRPR

Estimated binding specificities ?

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# IC=6.292 IC/col=0.899 n_of_columns=7 specificity:   
A |   7   0   0   7  75   0  73
C |   7  96  96   9   7  96   7
G |  73   0   0  73   7   0   9
T |   9   0   0   7   7   0   7
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updated Fri Sep 13 12:31:27 2024