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structure nameTIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (3 NANOSECOND PUMP-PROBE DELAY)
(Deoxyribodipyrimidine photo-lyase)
referenceApostolopoulou et al. Science 382 1015 2023
sourceMethanosarcina mazei Go1
experimentX-ray (resolution=2.35, R-factor=0.290)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYHRNEWMWRWRR

Estimated binding specificities ?

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# IC=6.440 IC/col=0.805 n_of_columns=8 specificity:   
A |   0   0   0   0  24   9   8  16
C |  96   0   0  96  24  69   8  48
G |   0   0   0   0  24   9  70  16
T |   0  96  96   0  24   9  10  16
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updated Sat Jan 10 00:46:13 2026