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structure nameTIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (30 MICROSECOND PUMP-PROBE DELAY)
(Deoxyribodipyrimidine photo-lyase)
referenceApostolopoulou et al. Science 382 1015 2023
sourceMethanosarcina mazei Go1
experimentX-ray (resolution=2.25, R-factor=0.321)
structural superfamilyCryptochrome/photolyase FAD-binding domain;Cryptochrome/photolyase, N-terminal domain;
sequence familyFAD binding domain of DNA photolyase;
reference complex7yc7_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHREWMWRWRR

Estimated binding specificities ?

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# IC=6.697 IC/col=0.837 n_of_columns=8 specificity:   
A |  14   7   3  24   0  88  96   0
C |  14  75   3  24   0   4   0   0
G |  54   7  85  24  96   2   0  96
T |  14   7   5  24   0   2   0   0
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updated Sun Aug 3 02:15:05 2025