interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAATC DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=1.70, R-factor=0.208)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQN

Estimated binding specificities ?

readout + contactlogo
# IC=5.894 IC/col=0.842 n_of_columns=7 specificity:   
A |  16  24  54   0   0  96   0
C |  54  24  13   0   0   0   0
G |  13  24   2   0   0   0  96
T |  13  24  27  96  96   0   0
scan!

home
updated Mon Jun 29 10:29:05 2026