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legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO DNA SEQUENCES
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=1.30, R-factor=0.183)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQNT

Estimated binding specificities ?

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# IC=6.566 IC/col=0.938 n_of_columns=7 specificity:   
A |   9  11   0   0   9  96   0
C |  57   9   0   0   2   0   0
G |  21  57   0   0   9   0  96
T |   9  19  96  96  76   0   0
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updated Tue Dec 17 19:07:04 2024