interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAAGC DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=0.253)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQN

Estimated binding specificities ?

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# IC=4.908 IC/col=0.701 n_of_columns=7 specificity:   
A |  19  24  24   0   0  77   0
C |  39  24  24   0   0  19   0
G |  19  24  24   0   0   0  96
T |  19  24  24  96  96   0   0
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updated Fri Sep 13 12:57:53 2024