interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAAGC DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=0.253)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQN

Estimated binding specificities ?

contactlogo
# IC=3.893 IC/col=0.556 n_of_columns=7 specificity:   
A |   0  13  96  85  24  24  18
C |  96  13   0   5  24  24  18
G |   0  13   0   3  24  24  42
T |   0  57   0   3  24  24  18
scan!

home
updated Sun Aug 3 02:30:31 2025