interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO DNA SEQUENCES
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=2.60, R-factor=0.245)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQN

Estimated binding specificities ?

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# IC=4.516 IC/col=0.645 n_of_columns=7 specificity:   
A |  13   0  96  96  24  24  13
C |  57   0   0   0  24  24  13
G |  13   0   0   0  24  24  57
T |  13  96   0   0  24  24  13
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updated Sat Jan 10 01:05:45 2026