interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAATG DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=1.45, R-factor=0.195)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQNTR

Estimated binding specificities ?

readout + contactlogo
# IC=6.494 IC/col=0.928 n_of_columns=7 specificity:   
A |   0   0  87  96  69   8   0
C |  96   0   0   0   8   8  17
G |   0   0   0   0  11  61  71
T |   0  96   9   0   8  19   8
scan!

home
updated Sun Aug 3 02:30:42 2025