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legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAATG DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=1.45, R-factor=0.195)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQNTR

Estimated binding specificities ?

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# IC=6.357 IC/col=0.908 n_of_columns=7 specificity:   
A |   0   0  88  96  64  16   0
C |  96   0   0   0   8   8  16
G |   0   0   0   0   8  56  72
T |   0  96   8   0  16  16   8
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updated Tue Dec 17 19:07:22 2024