interface graph thumbnail
legend  pdf

structure nameTRANSCRIPTION FACTOR BARHL2 BOUND TO TAAGT DNA SEQUENCE
(BarH-like 2 homeobox protein)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=0.234)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes8pm5_GM 8pn4_GM
reference complex8pmf_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRTQNTR

Estimated binding specificities ?

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# IC=5.974 IC/col=0.853 n_of_columns=7 specificity:   
A |  16  24   0   0   0  96   0
C |  54  24  56   0   0   0   0
G |  13  24  27   0   0   0  96
T |  13  24  13  96  96   0   0
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updated Mon Jun 29 10:29:54 2026