Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF INTEGRATOR-PP2A BOUND TO A PAUSED RNA POLYMERASE II-DSIF- NELF-NUCLEOSOME COMPLEX
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7unc_ABabcdefgh 7und_ABEZabdefgh 8gxq_ABCDEFGHPQs 8gxs_ABCDEFGHPQ
redundant complexes7unc 7und 8a3y 8bvw 8byq 8bz1 8gxq 8gxs
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LA----RG------                                       +7unc_a    
                                       +---------------1 
  ------RT------                    +-11               +8grq_A    
                                    !  !  
  ------RG------                 +-12  +---------------6iy2_A    
                                 !  !  
  ------RG------                 !  !              +7ccr_A    
                              +-16  +--------------2 
  LC----RT------              !  !                 +8hr1_E    
                              !  !  
  LT----RC------              !  !        +--------3kwq_E    
                              !  +--------6 
  --------RA----              !           +--------6g0l_D    
                              !  
  ------RT------              !              +---------7zs9_e    
                              !        +-----7 
  ------RA------       +-----17        !     !        +1zla_C    
                       !      !        !     +--------3 
  ------RG------       !      !     +-10              +8ox0_C    
                       !      !     !  !  
  LT----RC------       !      !     !  !     +---------4xzq_E    
                       !      !  +-14  +-----8 
  ------RG------       !      !  !  !        +---------5x0y_G    
                       !      !  !  !  
  ----------KG--       !      !  !  !                +7nkx_f    
                       !      +-15  +----------------4 
  ------RG------     -19         !                   +8jla_C    
                       !         !  
  QC----RG------       !         !     +-----------7y7i_E    
                       !         +-----9 
  ------RA----RA       !               +-----------6a5l_g    
                       !  
  ------RC------       !                       +---7xyf_B    
                       !          +------------5 
  ------RT------       !     +---13            +---7kbd_C    
                       !     !    !  
  --IT----------       +----18    +----------------3wkj_D    
                             !  
  ----KT--------   L         +---------------------7cvo_A    
                     

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updated Mon Aug 4 02:03:18 2025