8rm7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN ANDROGEN RECEPTOR DNA BINDING DOMAIN BOUND TO ITS RESPONSE ELEMENT: MMTV-177 GRE/ARE
reference	Van Eynde et al. 'J.Steroid 241 106499 2024
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8rm6_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8rm7_A interface=16,25,26,30, qktclicgdeasgahYgaltcgscKVffkRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlga > 8rm7_B interface=16,25,26,29,30, qktclicgdeasgahYgaltcgscKVffKRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlga
interface signature	YKVR/YKVKR

Estimated binding specificities ?

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# IC=7.451 IC/col=0.677 n_of_columns=11

specificity:

A |  72   0  78  24  24  24   6   0   0  64  96
C |   6  96   6  24  24  24   8   0   0  12   0
G |  12   0   6  24  24  24  12  96   0  12   0
T |   6   0   6  24  24  24  70   0  96   8   0

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updated Mon Dec 16 09:38:24 2024