8sfj_A : 3D-footprint complex

structure name	WT CRISPR-CAS12A WITH A 10BP R-LOOP
experiment	NMR
reference complex	8sfh_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sfj_A interface=14,83,92,167,174,178,187,317,326,329,378,380,381,382,385,581,590,591,690,691,693,748,861, mtqfegftnlyqvSktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsYrkekteetRnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyEnrkNvfsaedisTaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggiikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrvekfklnfqmpTlasgwdvnKekNngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfpDaAKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrprftsdkfffhvPitlnyqaaNSpskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrektikdlkqgylsqviheivdlmihyqavvvlenlNFgFkskrtgiaekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfaKmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpvienHrftgryrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn
interface signature	SYRTENTTKNDAKMKPNSNFFKH

Estimated binding specificities ?

contact

# IC=14.287 IC/col=0.595 n_of_columns=24

specificity:

A |   7   0   0  96   0   0   7  73  24  24  96   0  24   0  24  96  24  24  24  24  24  24  24   7
C |   7   0   0   0   0   0   9   9  24  24   0   0  24   0  24   0  24  24  24  24  24  24  24  73
G |   7   0   0   0  96   0  73   7  24  24   0  96  24  96  24   0  24  24  24  24  24  24  24   9
T |  75  96  96   0   0  96   7   7  24  24   0   0  24   0  24   0  24  24  24  24  24  24  24   7

scan!

home
updated Mon Jun 29 10:55:38 2026