8sfj_A : 3D-footprint complex

structure name	WT CRISPR-CAS12A WITH A 10BP R-LOOP
experiment	NMR
reference complex	8sfh_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sfj_A interface=14,83,92,167,174,178,187,317,326,329,378,380,381,382,385,581,590,591,690,691,693,748,861, mtqfegftnlyqvSktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsYrkekteetRnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyEnrkNvfsaedisTaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggiikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrvekfklnfqmpTlasgwdvnKekNngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfpDaAKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrprftsdkfffhvPitlnyqaaNSpskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrektikdlkqgylsqviheivdlmihyqavvvlenlNFgFkskrtgiaekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfaKmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpvienHrftgryrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn
interface signature	SYRTENTTKNDAKMKPNSNFFKH

Estimated binding specificities ?

contact

# IC=15.097 IC/col=0.629 n_of_columns=24

specificity:

A |   5  24  24  24  24  24  24  24   0   5   0  24   0   0  24  24   5  12  96   0   0  96  96  80
C |   5  24  24  24  24  24  24  24   0  69  96  24  96   0  24  24   5  64   0  96   0   0   0   5
G |  81  24  24  24  24  24  24  24   0  12   0  24   0   0  24  24   6  10   0   0   0   0   0   5
T |   5  24  24  24  24  24  24  24  96  10   0  24   0  96  24  24  80  10   0   0  96   0   0   6

scan!

home
updated Sun Aug 3 02:52:05 2025