8sfj_A : 3D-footprint complex

structure name	WT CRISPR-CAS12A WITH A 10BP R-LOOP
experiment	NMR
reference complex	8sfh_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sfj_A interface=14,83,92,167,174,178,187,317,326,329,378,380,381,382,385,581,590,591,690,691,693,748,861, mtqfegftnlyqvSktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsYrkekteetRnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyEnrkNvfsaedisTaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggiikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrvekfklnfqmpTlasgwdvnKekNngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfpDaAKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrprftsdkfffhvPitlnyqaaNSpskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrektikdlkqgylsqviheivdlmihyqavvvlenlNFgFkskrtgiaekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfaKmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpvienHrftgryrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn
interface signature	SYRTENTTKNDAKMKPNSNFFKH

Estimated binding specificities ?

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# IC=14.242 IC/col=0.593 n_of_columns=24

specificity:

A |   7   0   0  96   0   0   9  73  24  24  96   0  24   0  24  96  24  24  24  24  24  24  24   9
C |   7   0   0   0   0   0   7   7  24  24   0   0  24   0  24   0  24  24  24  24  24  24  24  73
G |   9   0   0   0  96   0  73   9  24  24   0  96  24  96  24   0  24  24  24  24  24  24  24   7
T |  73  96  96   0   0  96   7   7  24  24   0   0  24   0  24   0  24  24  24  24  24  24  24   7

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updated Tue Dec 17 19:27:48 2024