8sfh_A : 3D-footprint complex

structure name	WT CRISPR-CAS12A WITH A 5BP R-LOOP
experiment	NMR
redundant complexes	5b43_A 5kk5_A 5xh6_A 5xh7_A 8sfi_A 8sfj_A 8sfl_A 8sfn_A 8sfo_A 8sfp_A 8sfq_A 8sfr_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sfh_A interface=524,533,536,584,585,587,588,589,592,769,853,862,1033, mtqfegftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetrnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkfttyfsgfyenrknvfsaedistaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggiskikglnevlnlaiqkndetahiiaslphrfiplfkqilsdsfileefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriselksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmpTlasgwdvnKekNngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfPDaAKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngQaelfyrpksrmkrmahrlgekmlnkklkdqktpipdtlyqelydyvnhrdearallpnvitkevsheiikdrrftsdkfffhvPitlnyqaaNspskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlenlnfgfkskrtgiaekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfaKmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpvienhrftgryrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn
interface signature	TKNPDAKMKQPNK

Estimated binding specificities ?

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# IC=3.365 IC/col=0.561 n_of_columns=6

specificity:

A |   8   7  96   9  10  18
C |  10   7   0  11  10  18
G |   8   7   0  67  10  42
T |  70  75   0   9  66  18

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updated Wed Dec 18 19:25:38 2024