8sfl_A : 3D-footprint complex

structure name	WT CRISPR-CAS12A WITH A 15BP R-LOOP
experiment	NMR
reference complex	8sfh_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sfl_A interface=92,167,175,178,187,311,312,314,528,537,540,589,591,592,593,596,700,773,863,872,873,986,988,1043,1057,1283,1284, mtqfegftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetRnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyeNrkNvfsaedisTaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggiekikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrntlSFiLeefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriselksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmpTlasgwdvnKekNngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfpDaAKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyYaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngQaelfyrpksrmkrmahrlgekmlnkklkdqktpipdtlyqelydyvnhrlshdlsdearallpnvitkevsheiikdrrftsdkfffhvPitlnyqaaNSpskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlenlnFgFkskrtgiaekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfaKmgtqsgflfyvpaPytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpvienhrftgryrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngiSNqdwlayiqelrn
interface signature	RTNNTSFLTKNDAKMKYQPNSFFKPSN

Estimated binding specificities ?

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# IC=17.263 IC/col=0.959 n_of_columns=18

specificity:

A |  11  11   0   0  96   0   0   0  84  24  24  96   7   0   0   6  96  84
C |  11  11   0   0   0   0   0   0   6  24  24   0   6   0   0   3   0   6
G |  13   5   0   0   0  96   0  96   3  24  24   0  72   0  96  84   0   3
T |  61  69  96  96   0   0  96   0   3  24  24   0  11  96   0   3   0   3

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updated Tue Dec 17 19:28:34 2024