8sro_BD : 3D-footprint complex

structure name	FOXP3 TETRAMER ON TTTG REPEATS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8sro_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sro_B interface=61,62,65,66, hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdefe > 8sro_D interface=56,59,60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe
interface signature	RHSL/NRHSL

Estimated binding specificities ?

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# IC=12.445 IC/col=0.889 n_of_columns=14

specificity:

A |   5  96  96  80   5  96  24  24   6  96  96  80   5  96
C |  80   0   0   6  80   0  24  24  80   0   0   5  81   0
G |   5   0   0   5   5   0  24  24   5   0   0   5   5   0
T |   6   0   0   5   6   0  24  24   5   0   0   6   5   0

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updated Thu Sep 12 08:35:37 2024