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structure nameFOXP3 TETRAMER ON TTTG REPEATS
experimentNMR
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
multimeric complexes8sro_AC 8sro_BD 8srp_ACFHI 8srp_BDEGJ
redundant complexes8srp_J
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHSL

Estimated binding specificities ?

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# IC=5.300 IC/col=0.883 n_of_columns=6 specificity:   
A |   0   9  11   0   0   9
C |   0  11   9   0   0   9
G |   0  67   9   0   0  67
T |  96   9  67  96  96  11
scan!

Dendrogram of similar interfaces ?

matrix format
  
  --------NAST--RGHT--STFT--------   L            +--------------------1vtn_C    
                                                +-6 
  TT--KATTQTTG----LTRT----KA--FTYT   L          ! !              +-----2p7c_B    
                                                ! +--------------3 
  ----------RC----YG--------KT----           +--7                +-----2acj_B    
                                             !  ! 
  ------KT--RGST--RGYA------------   L       !  !                     +4bnc_A    
                                             !  +---------------------2 
  ------KT--RG----RGYA----KA------   L       !                        +5jvt_A    
                                           +-8 
  --------NAST--RGHT--STLT--------   L     ! !                  +------7cby_C    
                                           ! !        +---------4 
  --ST----NAST--RTHT--ST----------   L     ! !        !         !      +3l2c_A    
                                         +-9 +--------5         +------1 
  --ST----NAST--RTHT--STLT--------   L   ! !          !                +4lg0_A    
                                         ! !          ! 
  ------RTSTHG----------------RA--   L -10 !          +----------------3zpl_B    
                                         ! ! 
  ------KT--RGAT--RGNT------------   L   ! +---------------------------8smh_F    
                                         !  
  ----TG--RGRG--YC----------------   L   +-----------------------------4yo2_A    
                                       

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updated Sun Jan 11 01:20:47 2026