interface graph thumbnail
legend  pdf

structure nameFOXP3 TETRAMER ON TTTG REPEATS
experimentNMR
structural superfamily"Winged helix" DNA-binding domain;
sequence familyFork head domain;
multimeric complexes8sro_AC 8sro_BD 8srp_ACFHI 8srp_BDEGJ
redundant complexes8srp_J
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHSL

Estimated binding specificities ?

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# IC=5.418 IC/col=0.903 n_of_columns=6 specificity:   
A |   0   9   9   0   0   9
C |   0   9   9   0   0   9
G |   0  69   9   0   0  69
T |  96   9  69  96  96   9
scan!

Dendrogram of similar interfaces ?

matrix format
  
  --------NAST--RGHT--STLT------   L                          +------7cby_C    
                                                           +--1 
  --ST----NAST--RTHT--ST--------   L               +-------2  +------3l2c_A    
                                                   !       ! 
  ------RTSTHG--------------RA--   L       +-------3       +---------3zpl_B    
                                           !       ! 
  TT--KATTQTTG----LTRT----KAFTYT   L   +---4       +-----------------2p7c_B    
                                       !   ! 
  ------KT--RGAT--RGNT----------   L --5   +-------------------------8smh_F    
                                       ! 
  ----TG--RGRG--YC--------------   L   +-----------------------------4yo2_A    
                                     

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updated Sat Sep 14 12:03:27 2024