8srp_ACFHI : 3D-footprint complex

Interface of input file ?

structure name	FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8sro_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8srp_A interface=57,60,61,64,65, nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_C interface=55,58,59,62,63, dyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_F interface=59,60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_H interface=56,59,60, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlslhkcfvrvesekgavwtvdefe > 8srp_I interface=59, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlslhkcfvrvesekgavwtvdef
interface signature	NRHSL/NRHSL/RHSL/NRH/R

Estimated binding specificities ?

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# IC=12.289 IC/col=0.559 n_of_columns=22

specificity:

A |   4   4   4   0   0   6  24   6   4   0   0   0  24  24  24  24  24  24  24  24  24   6
C |   4   4   4   0   0   4  24   4   4   0   0   0  24  24  24  24  24  24  24  24  24   4
G |   4   6  82   0   0   4  24   4   6   0  96   0  24  24  24  24  24  24  24  24  24   4
T |  84  82   6  96  96  82  24  82  82  96   0  96  24  24  24  24  24  24  24  24  24  82

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updated Mon Dec 16 10:58:24 2024