8srp_ACFHI : 3D-footprint complex

Interface of input file ?

structure name	FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8sro_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8srp_A interface=57,60,61,64,65, nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_C interface=55,58,59,62,63, dyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_F interface=59,60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_H interface=56,59,60, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlslhkcfvrvesekgavwtvdefe > 8srp_I interface=59, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlslhkcfvrvesekgavwtvdef
interface signature	NRHSL/NRHSL/RHSL/NRH/R

Estimated binding specificities ?

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# IC=12.185 IC/col=0.554 n_of_columns=22

specificity:

A |  66  24  24  24  24  24  24  24  24  24  96   0  96  87  60  24  87  96  96   3  87  87
C |  15  24  24  24  24  24  24  24  24  24   0  96   0   3   9  24   3   0   0  87   3   3
G |   3  24  24  24  24  24  24  24  24  24   0   0   0   3  15  24   3   0   0   3   3   3
T |  12  24  24  24  24  24  24  24  24  24   0   0   0   3  12  24   3   0   0   3   3   3

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updated Thu Sep 12 08:35:51 2024