8srp_BDEGJ : 3D-footprint complex

Interface of input file ?

structure name	FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8sro_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8srp_B interface=58,61,62,65,66, hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_D interface=57,60,61,64,65, nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_E interface=59,63, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlSlhkcfvrvesekgavwtvdef > 8srp_G interface=60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknairHnlSLhkcfvrvesekgavwtvdef > 8srp_J interface=59,60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdef
interface signature	NRHSL/NRHSL/RS/HSL/RHSL

Estimated binding specificities ?

readout + contact

# IC=14.839 IC/col=0.645 n_of_columns=23

specificity:

A |  76  76  24  24  24  24  24  24  24  24   8  96  96  87   0  96  24   4  96  96  83   5  96
C |   8   4  24  24  24  24  24  24  24  24  75   0   0   4  96   0  24  88   0   0   4  83   0
G |   8   8  24  24  24  24  24  24  24  24   5   0   0   4   0   0  24   4   0   0   5   4   0
T |   4   8  24  24  24  24  24  24  24  24   8   0   0   1   0   0  24   0   0   0   4   4   0

scan!

home
updated Sat Jun 27 19:43:12 2026