8srp_BDEGJ : 3D-footprint complex

Interface of input file ?

structure name	FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS
experiment	NMR
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	8sro_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8srp_B interface=58,61,62,65,66, hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_D interface=57,60,61,64,65, nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe > 8srp_E interface=59,63, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlSlhkcfvrvesekgavwtvdef > 8srp_G interface=60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknairHnlSLhkcfvrvesekgavwtvdef > 8srp_J interface=59,60,63,64, mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdef
interface signature	NRHSL/NRHSL/RS/HSL/RHSL

Estimated binding specificities ?

readout + contact

# IC=14.648 IC/col=0.637 n_of_columns=23

specificity:

A |   0   3   6   0   0   0  24   0   0   0   0   0  13  24  24  24  24  24  24  24  24   7   6
C |   0   3   3   0   0   0  24   0   0   3   0   0   7  24  24  24  24  24  24  24  24  11  11
G |   0  84   3   0   0  92  24   0  96   3   0   0  65  24  24  24  24  24  24  24  24  13   7
T |  96   6  84  96  96   4  24  96   0  90  96  96  11  24  24  24  24  24  24  24  24  65  72

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updated Thu Sep 12 08:36:18 2024