interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE RHODOCOCCUS SP. USK13 DARR-20 BP DNA COMPLEX
reference'Nat 14 7239 2023 X-RAY DIFFRACTION
experimentX-ray (resolution=2.96, R-factor=0.242)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes8sva_AFGT
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTKYY

Estimated binding specificities ?

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# IC=2.714 IC/col=0.452 n_of_columns=6 specificity:   
A |  69   0   9  24  24   9
C |   9   0   9  24  24  67
G |   9  96   9  24  24   9
T |   9   0  69  24  24  11
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updated Sat Sep 14 12:04:17 2024