interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE RHODOCOCCUS SP. USK13 DARR-20 BP DNA COMPLEX
reference'Nat 14 7239 2023 X-RAY DIFFRACTION
experimentX-ray (resolution=2.96, R-factor=0.242)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes8sva_AFGT
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTKYY

Estimated binding specificities ?

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# IC=4.605 IC/col=0.767 n_of_columns=6 specificity:   
A |   0  24  16  80   0   0
C |   0  24  16  16  96   0
G |  80  24  16   0   0   0
T |  16  24  48   0   0  96
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updated Sun Jan 11 01:21:22 2026