8u0u_A : 3D-footprint complex

structure name	DDMD DIMER IN COMPLEX WITH SSDNA
experiment	NMR
redundant complexes	8u0w_A 8u3k_F 9c6q_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8u0u_A interface=194,197,245,249,287,599,694,737,741,743,784,785,786,789, mnvsieefthfdfqlvpepspldlviteslknhievngvksgallplpfqtgigktytalnfllqqmleqvrselkeentgkkskrllyyvtdsvdnvvsakadllkliekqtvkgeprftleqqeylkaqivhlpnqseqllqcsdavlndvligfnlnaerdvqaewsaisglrrhasnpevkislnrqagYfyRnlidrlqkkqkgadrvllsgsllasvetllpgekirngsahvaflttSkflKgfhntrsrysplrdlsgavliideidkqnqvilselcKqqaqdliwairtlranfrdhqlessprydkiedlfeplrerleefgtnwnlafafntenerpvrlfsdrsfthvssathklslksdflrrknlifsdltrfvneadviyqwflgtmrkavfqywenvrgllegtfqeavqsllthfnlqefesavyesfdtsssksyhhtglklvevahnqgtrdtvnckasflntspsgvladmvdagavilgisataradtvihnfdfkylnerlgnkllslsreqkqrvnnyyhsrrnykdngvvltvkylnsrdafldalleeykpearsshfilnhylgiaeseqaFvrswlskllasikafisspdnrymlsllnrtldttrqnindfiqfccdkwakefnvktktffgvnadwmrlvgydeiskhlntelgkvvvfstyAsmgagknpdyavnlalegeslisvadvqlrsdidsiylekptQlllSdDyshtanqlcqfhqilslqengelspksaenwcrqqlmgmsRERslQqyhqtsdyqsavrkyieqavgragrtslkrkqillfvdsglkeilaeesrdpslfsheyvalvnkaksaravrrlfnlaqrnnkdgmlsikalvhrlhnqpasksdiqewqdirtqllryptvafqperfnrlylqsmtkgyyryqgnldgdpnsfeffdrvpygdmvseedcslatlvqnqyvrpwferkgfacswqkeanvmtpimftniykgalgeqaveavltafdftfeevpnsiyerfdnrvifagieqpiwldsksegysskialveeefgpskfiyvnalgdtskpirylnscfvetspqlakvieipaliddtnrtavqelikwlhhs
interface signature	YRSKKFAQSDRERQ

Estimated binding specificities ?

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# IC=9.474 IC/col=0.861 n_of_columns=11

specificity:

A |   0   0  96   0  21   0  24  21   0  24   0
C |   0   0   0   0  21   0  24  10   0  24   0
G |   0   0   0   0  21   0  24  21   0  24   0
T |  96  96   0  96  33  96  24  44  96  24  96

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updated Wed Dec 18 19:39:05 2024