8u0w_A : 3D-footprint complex

structure name	DDMD MONOMER IN COMPLEX WITH SSDNA
experiment	NMR
reference complex	8u0u_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8u0w_A interface=136,137,189,193,248,286,562,657,704,708,710,751,752,753, nvsieefthfdfqlvpepspldlviteslknhievngvksgallplpfqtgigktytalnfllqqmleqvrselkeentgkkskrllyyvtdsvdnvvsakadllkliekqtvkgeprftleqqeylkaqivhlpNQseqllqcsdavlndvligfnlnaerdvqaewsaisglrrhasnpevkislnRqagYfyrnlidrlqkkqkgadrvllsgsllasvetllpgekirngsahvaflttskflKgfhntrsrysplrdlsgavliideidkqnqvilselcKqqaqdliwairteplrerleefgtnwnlafafnteganlnerpvrlfsdrsfthvssathkllltrfvneadviyqwflgtmrkavfqywlegtfqeavqsllthfnlqefesavyesfdtanklsssksyhhtglklvevahnqgtrdtvnckasflntspsgvladmvdagavilgisataradtvihnfdfkylnerlgnkllslsreqkqrvnnyyhsrrnykdngvvltvkylnsrdafldalleeykpearsshfilnhylgiaeseqaFvrswlskllasikafisspdnrymlsllnrtldttrqnindfiqfccdkwakefnvktktffgvnadwmrlvgydeiskhlntelgkvvvfstyAsmgagknpdyavnlalegeslisvadvtystqlrsdidsiylekptQlllSdDyshtanqlcqfhqilslqengelspksaenwcrqqlmgmsRERslqqyhqtsdyqsavrkyieqavgragrtslkrkqillfvdsglkeilaeesrdpslfsheyvalvnkaksagsivedravrrlfnlaqrnnkdgmlsikalvhrlhnqpasksdiqewqdirtqllryptvafqperfnrlylqsmtkgyyryqgnldgdpnsfeffdrvpygdmvseedcslatlvqnqyvrpwferkgfacswqkeanvmtpimftniykgalgeqaveavltafdftfeevpnsiyerfdnrvifagieqpiwldsksskialveeefgpskfiyvnalgdtskpirylnscfvetspqlakvieipaliddsnadtnrtavqelikwlhhs
interface signature	NQRYKKFAQSDRER

Estimated binding specificities ?

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# IC=12.121 IC/col=1.010 n_of_columns=12

specificity:

A |   0   0  96   0   9   7   9   7   0   0   0  11
C |   0   0   0   0   9   4  14   4   0   0   0   9
G |   0   0   0   0   9   4  11   4   0   0   0   9
T |  96  96   0  96  69  81  62  81  96  96  96  67

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updated Tue Dec 17 20:16:35 2024