8u72_BC : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE SPARTA OLIGOMER WITH GUIDE RNA AND TARGET DNA
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ifk_A 8ifk_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8u72_B interface=260,355,359,366, mrnkifishatpedddftrwlslkliglgyevwcdilflddfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsktfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwWndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtps > 8u72_C interface=72,190,380, mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitRpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykdaqfhdqlkarllehtiptqilrestlawrdfkntfgapiRdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkskplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi
interface signature	RHRW/RRM

Estimated binding specificities ?

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# IC=6.796 IC/col=0.485 n_of_columns=14

specificity:

A |   0  96  24  24  24  24  24  24  24  96  21  10   0   0
C |  96   0  24  24  24  24  24  24  24   0  33  42   0  96
G |   0   0  24  24  24  24  24  24  24   0  21  21   0   0
T |   0   0  24  24  24  24  24  24  24   0  21  23  96   0

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updated Fri Aug 1 19:22:45 2025