9c4c_EFGH : 3D-footprint complex

structure name	THE STRUCTURE OF TWO MNTR DIMERS BOUND TO THE NATIVE MNEP PROMOTER SEQUENCE
experiment	NMR
structural superfamily	Iron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
reference complex	9c4c_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 9c4c_E interface=33,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHpSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte > 9c4c_F interface=33,34,35,36,38,55, tpsmedyieqiymlieekgyarvsdiaealavHPSSvTkmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_G interface=33,34,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHPSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_H interface=34,35,38,39, tpsmedyieqiymlieekgyarvsdiaealavhPSsvTKmvqkldkdeyliyekyrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte
interface signature	HSTKY/HPSSTY/HPSTKY/PSTK

Estimated binding specificities ?

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# IC=18.384 IC/col=0.593 n_of_columns=31

specificity:

A |   0   0  24  24  24  24  24  24   0   0  96  69   1  24  90  74   1  96  96  24  24  24  24  24  24  90  19  76  94  24  96
C |  96  96  24  24  24  24  24  24  96   0   0   9   1  24   4  11   1   0   0  24  24  24  24  24  24   1  15  10   0  24   0
G |   0   0  24  24  24  24  24  24   0   0   0  15   1  24   1   1   1   0   0  24  24  24  24  24  24   4  49   9   1  24   0
T |   0   0  24  24  24  24  24  24   0  96   0   3  93  24   1  10  93   0   0  24  24  24  24  24  24   1  13   1   1  24   0

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updated Sat Aug 2 00:19:21 2025