9c4c_EFGH : 3D-footprint complex

structure name	THE STRUCTURE OF TWO MNTR DIMERS BOUND TO THE NATIVE MNEP PROMOTER SEQUENCE
experiment	NMR
structural superfamily	Iron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
reference complex	9c4c_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 9c4c_E interface=33,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHpSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte > 9c4c_F interface=33,34,35,36,38,55, tpsmedyieqiymlieekgyarvsdiaealavHPSSvTkmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_G interface=33,34,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHPSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_H interface=34,35,38,39, tpsmedyieqiymlieekgyarvsdiaealavhPSsvTKmvqkldkdeyliyekyrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte
interface signature	HSTKY/HPSSTY/HPSTKY/PSTK

Estimated binding specificities ?

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# IC=18.053 IC/col=0.582 n_of_columns=31

specificity:

A |   0   0  24  24  24  24  24  24   0   0  92  74   0  24  94  69   0  92  96  24  24  24  24  24  24  92  11  71  90  24  90
C |  96  96  24  24  24  24  24  24  96   0   3   2   3  24   0  11   0   3   0  24  24  24  24  24  24   0   7   5   4  24   1
G |   0   0  24  24  24  24  24  24   0   0   0  11   1  24   2   7   0   0   0  24  24  24  24  24  24   1  67   9   1  24   4
T |   0   0  24  24  24  24  24  24   0  96   1   9  92  24   0   9  96   1   0  24  24  24  24  24  24   3  11  11   1  24   1

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updated Thu Jan 8 17:14:23 2026