9c4c_EFGH : 3D-footprint complex

structure name	THE STRUCTURE OF TWO MNTR DIMERS BOUND TO THE NATIVE MNEP PROMOTER SEQUENCE
experiment	NMR
structural superfamily	Iron-dependent repressor protein, dimerization domain;"Winged helix" DNA-binding domain;
reference complex	9c4c_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 9c4c_E interface=33,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHpSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte > 9c4c_F interface=33,34,35,36,38,55, tpsmedyieqiymlieekgyarvsdiaealavHPSSvTkmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_G interface=33,34,35,38,39,55, tpsmedyieqiymlieekgyarvsdiaealavHPSsvTKmvqkldkdeyliyekYrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkt > 9c4c_H interface=34,35,38,39, tpsmedyieqiymlieekgyarvsdiaealavhPSsvTKmvqkldkdeyliyekyrglvltskgkkigkrlvyrhelleqflriigvdeekiyndvegiehhlswnsidrigdlvqyfeeddarkkdlksiqkkte
interface signature	HSTKY/HPSSTY/HPSTKY/PSTK

Estimated binding specificities ?

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# IC=16.764 IC/col=0.541 n_of_columns=31

specificity:

A |   1  24   1   7  24   1  24  24  24  24  24  24   0   4  82  11   3  24  90  11   1  96   0  24  24  24  24  24  24   2   0
C |   0  24   1  11  24   4  24  24  24  24  24  24   0   1  11   5   0  24   1   9   1   0   0  24  24  24  24  24  24   0   0
G |   1  24   0  11  24   1  24  24  24  24  24  24   0   1   2   7   1  24   4   9   4   0  96  24  24  24  24  24  24  94  96
T |  94  24  94  67  24  90  24  24  24  24  24  24  96  90   1  73  92  24   1  67  90   0   0  24  24  24  24  24  24   0   0

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updated Sun Jun 28 02:49:52 2026