1aay_A : 3D-footprint complex

structure name	ZIF268 ZINC FINGER-DNA COMPLEX (PROTEIN ZIF268 ZINC FINGER PEPTIDE)
reference	Elrod-Erickson et al.
source	Mus musculus
experiment	X-ray (resolution=1.60, R-factor=0.195)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1aay_A interface=16,18,19,22,44,45,46,47,50,72,74,75,78, rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr
interface signature	RDERRSDHTRDER

Estimated binding specificities ?

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# IC=11.522 IC/col=1.152 n_of_columns=10

specificity:

A |   0   0   0   0  19   0   0   0   0  19
C |   0  96   0   0   0   0   0  96   0  19
G |  96   0  96   0  76  96  96   0  96  19
T |   0   0   0  96   1   0   0   0   0  39

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updated Mon Dec 16 17:38:46 2024