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legend  pdf

structure nameMAT A1/ALPHA2/DNA TERNARY COMPLEX
referenceVershon et al.
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=2.50, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1le8_A 1le8_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRVINMR/RRNSNR

Estimated binding specificities ?

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# IC=12.509 IC/col=0.736 n_of_columns=17 specificity:   
A |   6   0  96  24  89  24  96  24  24  24  12   0   8   0  83   0  96
C |   6   0   0  24   1  24   0  24  24  24  12   7  12   0   1  96   0
G |   6  96   0  24   6  24   0  24  24  24   8   0  12   0   0   0   0
T |  78   0   0  24   0  24   0  24  24  24  64  89  64  96  12   0   0
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updated Mon Sep 9 11:50:17 2024