interface graph thumbnail
legend  pdf

structure nameWILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX
(PROTEIN GENE-REGULATING PROTEIN ARC)
referenceSchilbach et al. Proc.Natl.Acad.Sci.USA 96 811 1999
sourceEnterobacteria phage P22
experimentX-ray (resolution=2.50, R-factor=0.236)
structural superfamilyRibbon-helix-helix;
sequence familyArclike DNA binding domain;
multimeric complexes1bdt_ABCD 1bdv_ABCD 1par_ABCD
redundant complexes1bdv_D 1par_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMSQNR

Estimated binding specificities ?

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# IC=3.452 IC/col=0.493 n_of_columns=7 specificity:   
A |  13  24  34  16  96   4  85
C |  14  24  20  14   0   7   3
G |  13  24  20  14   0  81   5
T |  56  24  22  52   0   4   3
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updated Fri Sep 13 15:26:30 2024