1bdv_D : 3D-footprint complex

structure name	ARC FV10 COCRYSTAL (PROTEIN ARC FV10 REPRESSOR)
reference	Schildbach et al.
source	Enterobacteria phage P22
experiment	X-ray (resolution=2.80, R-factor=0.243)
structural superfamily	Ribbon-helix-helix;
sequence family	Arclike DNA binding domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1bdv_D interface=4,5,9,11,13, mkgMSkmpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr
interface signature	MSQNR

Estimated binding specificities ?

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# IC=4.721 IC/col=0.524 n_of_columns=9

specificity:

A |   5   6  24  24   0  96  24  12  84
C |  83  16  24  24   0   0  24  45   4
G |   4  20  24  24   0   0  24  19   4
T |   4  54  24  24  96   0  24  20   4

scan!

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updated Mon Dec 16 17:40:40 2024