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legend  pdf

structure nameSTRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
(ENDONUCLEASE ECORV 3.1.21.4)
referencePerona et al.
sourceEscherichia coli
experimentX-ray (resolution=2.00, R-factor=0.183)
structural superfamilyRestriction endonuclease-like;
sequence familyRestriction endonuclease EcoRV;
multimeric complexes1az0_AB 1b94_AB 1b95_AB 1b96_AB 1b97_AB 1bgb_AB 1bss_AB 1bsu_AB 1bua_AB 1eo3_AB 1eo4_AB 1eon_AB 1eoo_AB 1eop_AB 1rv5_AB 1rva_AB 1rvb_AB 1suz_AB 1sx8_AB 2b0d_AB 2b0e_AB 2ge5_AB 4rve_AB 5f8a_AB
reference complex1eon_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNKTNSNTN

Estimated binding specificities ?

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# IC=3.142 IC/col=0.524 n_of_columns=6 specificity:   
A |  13  57  24  24   0   0
C |  16  13  24  24   0  96
G |  54  13  24  24   0   0
T |  13  13  24  24  96   0
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updated Thu Sep 12 14:34:10 2024