interface graph thumbnail
legend  pdf

structure nameTATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
(TATA-BINDING PROTEIN)
referenceLittlefield et al.
sourcePYROCOCCUS WOESEI
experimentX-ray (resolution=2.40, R-factor=0.212)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1ais_AB 1d3u_AB
reference complex1ais_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFPLFVTNVFPLFVS

Estimated binding specificities ?

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# IC=7.770 IC/col=0.971 n_of_columns=8 specificity:   
A |  11  96  11   0   0  87  96  69
C |   8   0   8   0   0   8   0   8
G |   8   0   8   0   0   0   0  11
T |  69   0  69  96  96   1   0   8
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updated Thu Jan 8 17:49:01 2026