1jk1_A : 3D-footprint complex

structure name	ZIF268 D20A MUTANT BOUND TO WT DNA SITE (ZIF268)
reference	Miller et al.
source	MUS MUSCULUS
experiment	X-ray (resolution=1.90, R-factor=0.214)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1jk1_A interface=16,18,19,22,44,46,47,50,72,74,75,78, rpyacpvescdrrfsRsAEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr
interface signature	RAERRDHTRDER

Estimated binding specificities ?

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# IC=10.912 IC/col=1.091 n_of_columns=10

specificity:

A |  12   0   0   0   0   0  84   0  12   0
C |  60  96   0  96  96  96   0  96  12  96
G |  12   0  96   0   0   0   0   0  60   0
T |  12   0   0   0   0   0  12   0  12   0

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updated Mon Dec 16 17:58:14 2024