interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI
referenceChen-Park et al. J.Biol.Chem. 277 24694 2002
sourceMUS MUSCULUS
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
reference complex1nfk_A 9bdw_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCER/RRYEHK

Estimated binding specificities ?

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# IC=5.581 IC/col=0.797 n_of_columns=7 specificity:   
A |   0  63  14  19   0   0   3
C |   0  10  54  19   0   0  87
G |  96  13  14  19   0   0   3
T |   0  10  14  39  96  96   3
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updated Wed Jun 24 09:54:47 2026