interface graph thumbnail
legend  pdf

structure nameINHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
referenceWolberger et al. J.Biol.Chem. 277 45529 2002
sourceHOMO SAPIENS / MUS MUSCULUS
experimentX-ray (resolution=2.80, R-factor=?)
structural superfamilyHomeodomain-like;"Winged helix" DNA-binding domain;
reference complex1k78_A 2stt_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNSHSKISSSSNR/EKRRY

Estimated binding specificities ?

readout + contactlogo
# IC=11.197 IC/col=0.589 n_of_columns=19 specificity:   
A |   0   0   0  96   0  78  24  24  24   0  24  24  24  24   6  24   0  12   6
C |  96   0   0   0   0   6  24  24  24   6  24  24  24  24  66  24   6  12   0
G |   0  96  96   0  96   6  24  24  24  84  24  24  24  24  12  24   0  60  90
T |   0   0   0   0   0   6  24  24  24   6  24  24  24  24  12  24  90  12   0
scan!

home
updated Wed Jun 24 10:11:17 2026