interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX
referenceBleichenbacher et al. J.Mol.Biol. 332 783 2003
experimentX-ray (resolution=1.90, R-factor=0.201)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1nh2_AC 1ytf_AC 4v1n_ABMO 4v1o_ABMO 5fmf_1AMPQUV
reference complex1ytb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

readout + contactlogo
# IC=7.140 IC/col=0.892 n_of_columns=8 specificity:   
A |   0  96  24  96  96  54  96  13
C |   0   0  24   0   0  13   0  57
G |   0   0  24   0   0  16   0  13
T |  96   0  24   0   0  13   0  13
scan!

home
updated Thu Jan 8 18:27:25 2026