interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX
referenceBleichenbacher et al. J.Mol.Biol. 332 783 2003
experimentX-ray (resolution=1.90, R-factor=0.201)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1nh2_AC 1ytf_AC 4v1n_ABMO 4v1o_ABMO 5fmf_1AMPQUV
reference complex1ytb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

readout + contactlogo
# IC=7.140 IC/col=0.892 n_of_columns=8 specificity:   
A |  13   0  13   0   0  24   0  96
C |  16   0  13   0   0  24   0   0
G |  54   0  13   0   0  24   0   0
T |  13  96  57  96  96  24  96   0
scan!

home
updated Sun Jun 28 04:02:30 2026