| structure name | CRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX (TRANSCRIPTION INITIATION FACTOR IIA LARGE CHAIN) |
| reference | Bleichenbacher et al. J.Mol.Biol. 332 783 2003 |
| source | SACCHAROMYCES CEREVISIAE |
| experiment | X-ray (resolution=1.90, R-factor=0.201) |
| structural superfamily | Transcription factor IIA TFIIA, beta-barrel domain; |
| multimeric complexes | 1nh2_AC 1ytf_AC |
| redundant complexes | 1ytf |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: TFIIA | ||
| TATAAA | PubMed | 1nh2_AC(1.78e-05), 1ytf_AC(2.69e-08) |
| CATAAA | PubMed | 1nh2_AC(6.42e-03), 1ytf_AC(7.06e-05) |
| TAAAAA | PubMed | 1nh2_AC(1.78e-05), 1ytf_AC(7.06e-05) |
| TATATA | PubMed | 1ytf_AC(2.54e-08) |
| TTTAAA | PubMed | 1ytf_AC(5.53e-04) |
| AATAAAAG | PubMed | 1nh2_AC(6.20e-04), 1ytf_AC(1.30e-05) |
| TATAAG | PubMed | 1nh2_AC(6.34e-03), 1ytf_AC(7.01e-05) |
| TATAAAAG | PubMed | 1nh2_AC(1.18e-06), 1ytf_AC(8.20e-09) |
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updated Fri Sep 13 15:53:27 2024