structure name | VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE (HOMEOBOX PROTEIN VND) |
source | DROSOPHILA MELANOGASTER |
experiment | NMR |
structural superfamily | Homeodomain-like; |
sequence family | Homeobox domain; |
redundant complexes | 1nk2 |
reference complex | 1nk2_P |
links to other resources | NAKB ![]() |
protein sequence | |
interface signature | KRIQNY |
Estimated binding specificities ?
readout![]() | ![]() |
A | 5 20 0 96 96 24 5 5 C | 5 10 96 0 0 24 5 5 G | 81 16 0 0 0 24 21 80 T | 5 50 0 0 0 24 65 6scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: VND/NK-2 | ||
CAAGTG | PubMed | 1nk3_P(2.66e-05) |
AAGTG | PubMed | 1nk3_P(2.45e-03) |
Dendrogram of similar interfaces ?
matrix formathome
updated Sat Aug 2 01:18:30 2025