| structure name | VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE (HOMEOBOX PROTEIN VND) |
| source | DROSOPHILA MELANOGASTER |
| experiment | NMR |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| redundant complexes | 1nk2 |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KRIQNY |
Estimated binding specificities ?
readout + contact |  |
A | 4 17 0 96 82 24 4 4 C | 4 13 96 0 4 24 4 6 G | 84 10 0 0 4 24 17 82 T | 4 56 0 0 6 24 71 4scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: VND/NK-2 | ||
| CAAGTG | PubMed | 1nk3_P(2.66e-05) |
| AAGTG | PubMed | 1nk3_P(2.45e-03) |
Dendrogram of similar interfaces ?
matrix formathome
updated Mon Dec 16 18:15:03 2024