interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF NFAT1 BOUND AS A DIMER TO THE HIV-1 LTR KB ELEMENT
referencevon Koenig et al. Nat.Struct.Biol. 10 800 2003
sourceHomo sapiens
experimentX-ray (resolution=2.60, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
reference complex1p7h_L
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRYTERRQKR/RYTERRQKR

Estimated binding specificities ?

readout + contactlogo
# IC=8.855 IC/col=0.681 n_of_columns=13 specificity:   
A |   7   0   0   0  24  66  24  24  24   0   0  22  66
C |   7   0  96  96  24   7  24  24  24   0   0   0   7
G |   9   0   0   0  24   7  24  24  24  96  96  73  14
T |  73  96   0   0  24  16  24  24  24   0   0   1   9
scan!

home
updated Fri Dec 13 10:53:40 2024