1pzu_BHIM : 3D-footprint complex

structure name	AN ASYMMETRIC NFAT1-RHR HOMODIMER ON A PSEUDO-PALINDROMIC, KAPPA-B SITE
reference	Harrison et al.
source	Homo sapiens
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	p53-like transcription factors;E set domains;"Winged helix" DNA-binding domain;
reference complex	1p7h_L 3qrf_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1pzu_B interface=23,26,29,32,139,173, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv > 1pzu_H interface=23,26,29,32,139,173, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv > 1pzu_I interface=23,26,29,32,139,173, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv > 1pzu_M interface=23,26,29,32,139,173, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv
interface signature	RYERRQ/RYERRQ/RYERRQ/RYERRQ

Estimated binding specificities ?

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# IC=20.440 IC/col=0.786 n_of_columns=26

specificity:

A |   0   0   0  81  24  24  24  24   0   0  96  80  24   6   0   0   0  80  24  24  24  80   0   0  96  80
C |   0  96  96   5  24  24  24  24   0   0   0   5  24   5   0  96  96   6  24  24  24   5   0   0   0   5
G |   0   0   0   5  24  24  24  24  96  96   0   6  24   5   0   0   0   5  24  24  24   5  96  96   0   5
T |  96   0   0   5  24  24  24  24   0   0   0   5  24  80  96   0   0   5  24  24  24   6   0   0   0   6

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updated Mon Sep 9 13:58:07 2024