1r0n_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HETERODIMERIC ECDSYONE RECEPTOR DNA BINDING COMPLEX
reference	Devarakonda et al. 'Embo 22 5827 2003
source	DROSOPHILA MELANOGASTER / HOMO SAPIENS
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	2han_B 6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1r0n_A interface=21,24,28,29, hicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqaaaa > 1r0n_B interface=15,21,24,28,29,53, elclvcgdrasgyhYnaltcEgcKgffRRsvtksavycckfgracemdmymrRkcqecrlkkclavgmrpecvvpenqcamkrrek
interface signature	EKKR/YEKRRR

Estimated binding specificities ?

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# IC=9.559 IC/col=0.869 n_of_columns=11

specificity:

A |   0   0  24   0  72  24  12   0  60   0   0
C |   0   0  24  96  12  24   0   0  12  96  96
G |  96  96  24   0  12  24  12  96  12   0   0
T |   0   0  24   0   0  24  72   0  12   0   0

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updated Mon Sep 9 14:00:28 2024