1r0o_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HETERODIMERIC ECDYSONE RECEPTOR DNA-BINDING COMPLEX
reference	Devarakonda et al. 'Embo 22 5827 2003
source	DROSOPHILA MELANOGASTER
experiment	X-ray (resolution=2.24, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	2han_A 2han_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1r0o_A interface=21,24,28,29, hlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacrenrnciidkrqrnrcqycryqkcltcgmkreavqee > 1r0o_B interface=16,22,25,29,30, eelclvcgdrasgyhYnaltcEgcKgffRRsvtksavycckfgracemdmymrrkcqecrlkkclavgmrpecvvpen
interface signature	EKKR/YEKRR

Estimated binding specificities ?

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# IC=9.298 IC/col=0.930 n_of_columns=10

specificity:

A |   0   0   0  67  24   9   0  67   0   0
C |   0   0  96   9  24   9   0   9  96  96
G |  96   0   0   9  24  11  96   9   0   0
T |   0  96   0  11  24  67   0  11   0   0

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updated Mon Sep 9 14:00:36 2024