| structure name | CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE(75-356) DIMER BOUND TO A COC' CORE SITE |
| reference | Radman-Livaja et al. Nature 435 1059 2005 |
| source | ENTEROBACTERIA PHAGE LAMBDA |
| experiment | X-ray (resolution=2.80, R-factor=0.218) |
| structural superfamily | DNA breaking-rejoining enzymes; |
| sequence family | Phage integrase family; Phage integrase, Nterminal SAMlike; |
| multimeric complexes | 5j0n_EKLMNO 5j0n_FIJ |
| redundant complexes | 1p7d 1z1g 1z1b 2wcc |
| reference complex | 2wcc_3 |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KTNYSASLKSRYM |
Estimated binding specificities ?
| readout + contact |  |
A | 0 24 7 0 73 7 0 0 0 73 C | 0 24 75 96 7 9 96 0 0 9 G | 0 24 7 0 9 7 0 0 0 7 T | 96 24 7 0 7 73 0 96 96 7scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: LAMBDA INTEGRASE | ||
| GAAAA | PubMed | 2wcc_3(2.92e-03) |
| CAACTTNNT | PubMed | 1z19_A(7.53e-03) |
| CACGTGAC | PubMed | 1z1b_B(1.78e-03) |
Dendrogram of similar interfaces ?
matrix format--KGTA--NAYTSA------ATST----LT----------KA--------STRGYT---- L +----------1z19_A +-1 KTKATT--AAYCHTWTHTKT----KGTT----LTNC--------NCTC--QGKG------ L +-------2 +----------2a3v_B ! ! --HTTTKGMT--ST--------KATT----QT--QT--------STRG--EA-------- L +-----3 +-----------1xo0_B ! ! ----------------------------------------KA--------RG----NAKA --4 +-------------------1p4e_A ! ------------------------------------RGKA--RG----AATG----NT-- L +-------------------------2v6e_B |
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updated Thu Jan 8 19:30:33 2026