interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS
(Replication termination protein)
referenceWilce et al. J.Mol.Biol. 370 481 2007
sourceBacillus subtilis
experimentX-ray (resolution=2.50, R-factor=0.293)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyReplication terminator protein;
multimeric complexes1f4k_AB 2dpd_AB 2efw_AB 2efw_FG
reference complex1f4k_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRLNHTYRQ

Estimated binding specificities ?

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# IC=7.099 IC/col=0.887 n_of_columns=8 specificity:   
A |   0  24  13   0  13  96  96   0
C |   0  24  54   0  13   0   0  96
G |  96  24  16   0  54   0   0   0
T |   0  24  13  96  16   0   0   0
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updated Thu Sep 12 16:02:53 2024