interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE JUN BZIP HOMODIMER COMPLEXED WITH AP-1 DNA
(Viral jun transforming protein)
referenceBorovilos et al. 'To ? ? ?
sourceAvian sarcoma virus
experimentX-ray (resolution=2.30, R-factor=0.224)
structural superfamilyLeucine zipper domain;A DNA-binding domain in eukaryotic transcription factors;
sequence familybZIP transcription factor; Basic region leucine zipper;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNAASR

Estimated binding specificities ?

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# IC=5.339 IC/col=0.890 n_of_columns=6 specificity:   
A |  67   0   0   9  96   9
C |  11  96   0  67   0   9
G |   9   0   0  11   0   9
T |   9   0  96   9   0  69
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updated Mon Dec 16 19:36:57 2024