1s9k_CDE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN NFAT1 AND FOS-JUN ON THE IL-2 ARRE1 SITE
reference	Stroud et al. 'To ? ? ?
source	HOMO SAPIENS
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	p53-like transcription factors;E set domains;
reference complex	1p7h_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1s9k_C interface=23,26,29,32,139,173,174, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv > 1s9k_D interface=4,8,11,12,16, rriRrerNkmAAakcRnrrreltdtlqaetdqledeksalqteianllkekek > 1s9k_E interface=6,9,13,14, rkrmrNriAaskCRkrkleriarleekvktlkaqnselastanmlreqvaql
interface signature	RYERRQR/RNAAR/NACR

Estimated binding specificities ?

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# IC=13.047 IC/col=0.870 n_of_columns=15

specificity:

A |   0   0  74   0  96   0  67  24  24   1  14  10   0   0  92
C |   0   0   5  96   0  92   7  24  24   7  10  10   0  96   3
G |   0   0   7   0   0   0  10  24  24   3  12   7   0   0   0
T |  96  96  10   0   0   4  12  24  24  85  60  69  96   0   1

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updated Fri Dec 13 11:12:29 2024