interface graph thumbnail
legend  pdf

structure nameCO-CRYSTAL OF BACTERIOPHAGE T4 RNASE H WITH A FORK DNA SUBSTRATE
(Ribonuclease H)
referenceMueser et al. J.Biol.Chem. 282 31713 2007
sourceEnterobacteria phage T4
experimentX-ray (resolution=3.00, R-factor=0.225)
structural superfamilyPIN domain-like;5' to 3' exonuclease, C-terminal subdomain;
sequence familyT4 RNase H, C terminal;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --IG--STTGLTVA------------NCSGKCFGNGKAKANAKASA--STWTECFCHA----MAHT----RTKCLCNGSC                    +-------------2ihn_A    
                                                                                            +---------1 
  ----------FCRT--KCHANGSA--------------LT------KC----------FTFC----RTLA----------   L   +--2         +-------------5hp4_A    
                                                                                         !  ! 
  IT--YTQT--KT--------------------------------------------------------------------     --3  +-----------------------4q0w_A    
                                                                                         ! 
  ------------AGVG--QC----QCMC----------------------------------------------------       +--------------------------5zoe_A    
                                                                                       

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updated Tue Dec 17 22:50:43 2024