interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF SCR/EXD COMPLEX BOUND TO A CONSENSUS HOX-EXD SITE
(HOMEOBOX PROTEIN EXTRADENTICLE)
referenceAggarwal et al. 'Cell(Cambridge,Mass.)' 131 530 2007
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.60, R-factor=0.255)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes1b8i_AB 2r5y_AB 2r5z_AB
reference complex1b8i_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNIR

Estimated binding specificities ?

contactlogo
# IC=4.908 IC/col=0.982 n_of_columns=5 specificity:   
A |   0   0  96  19  77
C |   0   0   0  19   0
G |   0  96   0  19   0
T |  96   0   0  39  19
scan!

home
updated Wed Dec 21 21:44:39 2022