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structure nameMOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS
referenceCabaniols et al. Nature 456 107 2008
sourceCHLAMYDOMONAS REINHARDTII
experimentX-ray (resolution=1.95, R-factor=?)
structural superfamilyHoming endonucleases;
reference complex1t9i_B 2vbo_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSIQENSYRKKTRESVNKT/SIQNSSRKQTYRSSVNKT

Estimated binding specificities ?

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# IC=22.831 IC/col=0.993 n_of_columns=23 specificity:   
A |   4   0  96   0   0  93   0   0   0   5  12  24  24  73  80  96  83  96   0   2   0  91  83
C |   2   0   0   0   0   2   0  96  96   9  11  24  24   4   7   0   0   0   0   2  96   0   2
G |   2   0   0  96  96   1   0   0   0   4   7  24  24  10   7   0  12   0  96  73   0   3   7
T |  88  96   0   0   0   0  96   0   0  78  66  24  24   9   2   0   1   0   0  19   0   2   4
scan!

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updated Mon Sep 9 16:03:17 2024