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legend  pdf

structure nameCRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA
referenceMiyazono et al. 'Embo 29 1613 2010
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex3a01_E 3lnq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRRTQN/RRQVQN

Estimated binding specificities ?

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# IC=11.228 IC/col=1.021 n_of_columns=11 specificity:   
A |   5  11  96  96   8   0  79  96   0   0   0
C |  13  12   0   0  16   0   5   0   0   0   0
G |   5  11   0   0  16   0   7   0   0   0  96
T |  73  62   0   0  56  96   5   0  96  96   0
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updated Mon Sep 9 16:15:19 2024